Crystal structure of the Anaerobic DesB-Gallate complex
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | LigA | e3wr9B2 | A: alpha arrays | X: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | H: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | T: LigA subunit of an aromatic-ring-opening dioxygenase LigAB | F: LigA | ECOD (1.6) |
| B | LigB | e3wr9B1 | A: a/b three-layered sandwiches | X: LigB-like (From Topology) | H: LigB-like (From Topology) | T: LigB-like | F: LigB | ECOD (1.6) |
| A | LigA | e3wr9A2 | A: alpha arrays | X: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | H: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | T: LigA subunit of an aromatic-ring-opening dioxygenase LigAB | F: LigA | ECOD (1.6) |
| A | LigB | e3wr9A1 | A: a/b three-layered sandwiches | X: LigB-like (From Topology) | H: LigB-like (From Topology) | T: LigB-like | F: LigB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.830.10 | Alpha Beta | 3-Layer(aba) Sandwich | Protocatechuate 4,5-dioxygenase | Chain B | CATH (4.3.0) |
| B | 1.10.700.10 | Mainly Alpha | Orthogonal Bundle | Protocatechuate 4,5-dioxygenase | Chain A | CATH (4.3.0) |
| A | 3.40.830.10 | Alpha Beta | 3-Layer(aba) Sandwich | Protocatechuate 4,5-dioxygenase | Chain B | CATH (4.3.0) |
| A | 1.10.700.10 | Mainly Alpha | Orthogonal Bundle | Protocatechuate 4,5-dioxygenase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02900 | Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) | Catalytic LigB subunit of aromatic ring-opening dioxygenase | Domain | ||
| PF07746 | Aromatic-ring-opening dioxygenase LigAB, LigA subunit (LigA) | Aromatic-ring-opening dioxygenase LigAB, LigA subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011986 | Extradiol ring-cleavage dioxygenase LigAB, LigA subunit | Domain | |
| IPR034940 | Gallate dioxygenase, C-terminal | Domain | |
| IPR036622 | Dioxygenase LigAB, LigA subunit superfamily | Homologous Superfamily | |
| IPR034939 | Gallate dioxygenase, N-terminal | Domain | |
| IPR004183 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | Domain |














