GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2Y4L designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2Y4L_GDP_A_401 | 86% | 31% | 0.109 | 0.977 | 1.21 | 1.53 | 2 | 7 | 0 | 0 | 100% | 1 |
| 2Y4L_GDP_B_401 | 76% | 35% | 0.123 | 0.961 | 1.13 | 1.41 | 2 | 5 | 0 | 0 | 100% | 1 |
| 2Y4K_GDP_B_401 | 80% | 47% | 0.107 | 0.956 | 0.96 | 1.08 | 1 | 4 | 0 | 0 | 100% | 1 |
| 2BO7_GDP_B_1383 | 76% | 37% | 0.136 | 0.973 | 1.04 | 1.41 | 1 | 5 | 4 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
