GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3T5G designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3T5G_GDP_A_201 | 91% | 52% | 0.087 | 0.973 | 0.87 | 0.98 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6BSX_GDP_A_203 | 96% | 26% | 0.069 | 0.976 | 1.71 | 1.31 | 6 | 3 | 0 | 0 | 100% | 1 |
| 3SEA_GDP_A_201 | 93% | 45% | 0.088 | 0.982 | 0.94 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 7BTC_GDP_C_201 | 90% | 38% | 0.102 | 0.984 | 0.82 | 1.58 | - | 6 | 0 | 0 | 100% | 1 |
| 5YXH_GDP_A_201 | 84% | 44% | 0.107 | 0.969 | 0.97 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4O2R_GDP_B_201 | 83% | 44% | 0.105 | 0.965 | 0.96 | 1.19 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
