PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 4RKD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4RKD_PLP_F_401 | 88% | 3% | 0.107 | 0.982 | 4.05 | 2.23 | 3 | 5 | 2 | 0 | 100% | 1 |
| 4RKD_PLP_A_402 | 85% | 5% | 0.119 | 0.984 | 3.49 | 1.75 | 3 | 7 | 1 | 0 | 100% | 0.6 |
| 4RKD_PLP_B_401 | 85% | 3% | 0.121 | 0.986 | 3.41 | 2.71 | 3 | 10 | 1 | 0 | 100% | 1 |
| 4RKD_PLP_C_402 | 80% | 2% | 0.131 | 0.982 | 4.14 | 2.82 | 4 | 8 | 1 | 0 | 100% | 1 |
| 4RKD_PLP_E_402 | 53% | 6% | 0.206 | 0.968 | 3.35 | 1.71 | 4 | 4 | 1 | 0 | 100% | 0.6 |
| 6ZVG_PLP_C_402 | 73% | 61% | 0.135 | 0.961 | 0.85 | 0.66 | - | - | 1 | 0 | 100% | 1 |
| 6ZUR_PLP_B_405 | 25% | 55% | 0.256 | 0.895 | 0.68 | 1.03 | - | 1 | 11 | 0 | 100% | 0.9 |
| 6ZUP_PLP_A_401 | 19% | 54% | 0.293 | 0.889 | 0.84 | 0.93 | - | - | 1 | 0 | 100% | 0.9 |
| 2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
| 3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
| 3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
| 4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |
