SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6JLL designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6JLL_SQD_a_414 | 80% | 36% | 0.087 | 0.935 | 0.98 | 1.53 | 3 | 12 | 1 | 0 | 100% | 1 |
| 6JLL_SQD_A_412 | 77% | 36% | 0.088 | 0.928 | 0.97 | 1.53 | 3 | 11 | 5 | 0 | 100% | 1 |
| 6JLL_SQD_a_405 | 52% | 41% | 0.098 | 0.852 | 1.06 | 1.22 | 3 | 4 | 2 | 0 | 100% | 1 |
| 6JLL_SQD_A_416 | 51% | 43% | 0.105 | 0.856 | 1.03 | 1.18 | 3 | 6 | 1 | 0 | 100% | 1 |
| 6JLL_SQD_b_601 | 50% | 34% | 0.105 | 0.855 | 1.04 | 1.55 | 3 | 9 | 3 | 0 | 100% | 1 |
| 6JLL_SQD_B_621 | 42% | 37% | 0.119 | 0.837 | 1.03 | 1.45 | 3 | 10 | 4 | 0 | 100% | 1 |
| 6JLL_SQD_F_103 | 32% | 30% | 0.122 | 0.831 | 1.15 | 1.64 | 3 | 11 | 2 | 0 | 80% | 1 |
| 6JLL_SQD_f_102 | 18% | 34% | 0.146 | 0.767 | 1.18 | 1.41 | 3 | 7 | 3 | 0 | 80% | 1 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 0 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 85% | 35% | 0.081 | 0.944 | 0.97 | 1.59 | 3 | 13 | 2 | 0 | 100% | 1 |
| 6JLO_SQD_a_413 | 81% | 36% | 0.083 | 0.934 | 0.96 | 1.56 | 3 | 12 | 2 | 0 | 100% | 1 |
| 6JLM_SQD_a_410 | 80% | 33% | 0.085 | 0.933 | 0.98 | 1.64 | 3 | 11 | 7 | 0 | 100% | 1 |
