GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 8YPZ designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8YPZ_GDP_A_1003 | 37% | 42% | 0.161 | 0.86 | 0.98 | 1.27 | 1 | 5 | 4 | 0 | 100% | 1 |
| 8YPZ_GDP_F_3001 | 20% | 37% | 0.201 | 0.802 | 1.02 | 1.44 | 1 | 4 | 5 | 0 | 100% | 1 |
| 8YPZ_GDP_C_1004 | 19% | 41% | 0.202 | 0.796 | 1 | 1.27 | 2 | 6 | 2 | 0 | 100% | 1 |
| 8YPZ_GDP_A_1004 | 15% | 42% | 0.198 | 0.759 | 1.01 | 1.23 | 1 | 4 | 6 | 0 | 100% | 1 |
| 8YPZ_GDP_E_1003 | 5% | 39% | 0.287 | 0.698 | 1.11 | 1.26 | 1 | 5 | 6 | 0 | 100% | 1 |
| 8YPZ_GDP_C_1003 | 4% | 39% | 0.216 | 0.629 | 1.07 | 1.29 | 1 | 3 | 1 | 0 | 86% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
