8XU1 | pdb_00008xu1

DaCS-oxaloacetate complex

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 
    0.258 (Depositor), 0.256 (DCC) 
  • R-Value Work: 
    0.211 (Depositor), 0.217 (DCC) 
  • R-Value Observed: 
    0.213 (Depositor) 

Starting Model: in silico
View more details

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history. 


Literature

DaCS-oxaloacetate complex

Yang, L., Fang, Y.J.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
citrate synthase
A, B, C
435Desulfurella acetivorans A63Mutation(s): 19 
EC: 2.3.3.16
UniProt
Find proteins for A0A7C6A739 (Desulfurella acetivorans)
Explore A0A7C6A739 
Go to UniProtKB:  A0A7C6A739
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A7C6A739
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free:  0.258 (Depositor), 0.256 (DCC) 
  • R-Value Work:  0.211 (Depositor), 0.217 (DCC) 
  • R-Value Observed: 0.213 (Depositor) 
Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 155.1α = 90
b = 111.28β = 116.07
c = 99.56γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China--

Revision History  (Full details and data files)

  • Version 1.0: 2025-01-22
    Type: Initial release