Download MendeleyStructure of S1_8A, a lambda-carrageenan specific sulfatase, in complex with monosaccharide
Hettle, J.A., Vickers, C., Boraston, A.B.To be published.
9BES | pdb_00009bes
Structure of S1_8A, a lambda-carrageenan specific sulfatase, in complex with monosaccharide
- PDB DOI: https://doi.org/10.2210/pdb9BES/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Pseudoalteromonas distincta
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2024-04-16 Released: 2025-08-27
- Funding Organization(s): Natural Sciences and Engineering Research Council (NSERC, Canada)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.08 Å
- R-Value Free: 0.263 (Depositor), 0.263 (DCC)
- R-Value Work: 0.199 (Depositor), 0.199 (DCC)
- R-Value Observed: 0.202 (Depositor)
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| S1_8A Sulfatase | 514 | Pseudoalteromonas distincta | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| S1_8A Sulfatase | 514 | Pseudoalteromonas distincta | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GAL (Subject of Investigation/LOI) Query on GAL | C [auth A] | beta-D-galactopyranose C6 H12 O6 WQZGKKKJIJFFOK-FPRJBGLDSA-N |  | ||
| EDO Query on EDO | F [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| CA Query on CA | D [auth A], E [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.08 Å
- R-Value Free: 0.263 (Depositor), 0.263 (DCC)
- R-Value Work: 0.199 (Depositor), 0.199 (DCC)
- R-Value Observed: 0.202 (Depositor)
Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 49.683 | α = 77.44 |
| b = 56.202 | β = 76.06 |
| c = 97.232 | γ = 64.03 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data scaling |
| HKL-2000 | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-08-27 Deposition Author(s): Hettle, J.A., Vickers, C., Boraston, A.B.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | -- |
Revision History (Full details and data files)
- Version 1.0: 2025-08-27
Type: Initial release
