Crystal structure of human ribokinase in complex with K+, Mg2+, and AMPCP
Akanmori, N.N., Park, J.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ribokinase | 330 | Homo sapiens | Mutation(s): 0  Gene Names: RBKS, RBSK EC: 2.7.1.15 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9H477 (Homo sapiens) Explore Q9H477  Go to UniProtKB:  Q9H477 | |||||
PHAROS:  Q9H477 GTEx:  ENSG00000171174  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9H477 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A12 (Subject of Investigation/LOI) Query on A12 | D [auth A], L [auth B] | PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER C11 H17 N5 O9 P2 OLCWZBFDIYXLAA-IOSLPCCCSA-N | |||
PG4 Query on PG4 | H [auth B] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
PEG Query on PEG | E [auth A], I [auth B], J [auth B], K [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
K (Subject of Investigation/LOI) Query on K | F [auth A], M [auth B] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
CL Query on CL | N [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
MG (Subject of Investigation/LOI) Query on MG | G [auth A], O [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 45.38 | α = 90 |
b = 70.75 | β = 92.36 |
c = 90.65 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
pointless | data scaling |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
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Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | RGPIN-2020-04281 |