Structural basis of iron piracy by human gut Bacteroides
Silale, A., Soo, Y.L., Mark, H., Basle, A., van den Berg, B.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DUF4374 domain-containing protein | 440 | Bacteroides thetaiotaomicron VPI-5482 | Mutation(s): 0  Gene Names: BT_2064 | ![]() | |
UniProt | |||||
Find proteins for Q8A622 (Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)) Explore Q8A622  Go to UniProtKB:  Q8A622 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8A622 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MES Query on MES | D [auth A], H [auth B] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N | |||
CA Query on CA | E [auth B], F [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | C [auth A], G [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 45.705 | α = 90 |
b = 108.633 | β = 96.574 |
c = 93.894 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
xia2 | data scaling |
HKL-3000 | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Wellcome Trust | United Kingdom | 214222/Z/18/Z |