CRYSTAL STRUCTURE OF THE ECTODOMAIN OF HUMAN TRANSFERRIN RECEPTOR
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Transferrin receptor-like dimerisation domain | 8037591 | 3000375 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | PA domain | 8043922 | 3000955 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Zn-dependent exopeptidases | 8032205 | 3000662 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TFR_dimer | e1cx8A1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
A | Peptidase_M28 | e1cx8A2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
A | PA | e1cx8A3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
B | TFR_dimer | e1cx8B1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
B | Peptidase_M28 | e1cx8B2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
B | PA | e1cx8B3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
C | TFR_dimer | e1cx8C1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
C | Peptidase_M28 | e1cx8C2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
C | PA | e1cx8C3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
D | TFR_dimer | e1cx8D1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
D | Peptidase_M28 | e1cx8D2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
D | PA | e1cx8D3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
E | TFR_dimer | e1cx8E1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
E | Peptidase_M28 | e1cx8E2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
E | PA | e1cx8E3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
F | TFR_dimer | e1cx8F1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
F | Peptidase_M28 | e1cx8F2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
F | PA | e1cx8F3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
G | TFR_dimer | e1cx8G1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
G | Peptidase_M28 | e1cx8G2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
G | PA | e1cx8G3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
H | TFR_dimer | e1cx8H1 | A: alpha bundles | X: N-cbl like | H: Transferrin receptor ectodomain, C-terminal domain (From Topology) | T: Transferrin receptor ectodomain, C-terminal domain | F: TFR_dimer | ECOD (1.6) |
H | Peptidase_M28 | e1cx8H2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
H | PA | e1cx8H3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04253 | Transferrin receptor-like dimerisation domain (TFR_dimer) | Transferrin receptor-like dimerisation domain | This domain is involved in dimerisation of the transferrin receptor as shown in its crystal structure. | Domain | |
PF04389 | Peptidase family M28 (Peptidase_M28) | Peptidase family M28 | Domain | ||
PF02225 | PA domain (PA) | PA domain | The PA (Protease associated) domain is found as an insert domain in diverse proteases. The PA domain is also found in a plant vacuolar sorting receptor Swiss:O22925 and members of the RZF family Swiss:O43567. It has been suggested that this domain fo ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036757 | Transferrin receptor-like, dimerisation domain superfamily | Homologous Superfamily | |
IPR039373 | Transferrin receptor protein 1/Glutamate carboxypeptidase 2-like | Family | |
IPR003137 | PA domain | Domain | |
IPR046450 | PA domain superfamily | Homologous Superfamily | |
IPR007365 | Transferrin receptor-like, dimerisation domain | Domain | |
IPR037324 | Transferrin receptor protein 1/2, PA domain | Domain | |
IPR007484 | Peptidase M28 | Domain |