8RTL | pdb_00008rtl

Af Aio C65F-C80G


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF01568Molydopterin dinucleotide binding domain (Molydop_binding)Molydopterin dinucleotide binding domainThis domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entire s ...This domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entire subunit. The formylmethanofuran dehydrogenase catalyses the first step in methane formation from CO2 in methanogenic archaea and has a molybdopterin dinucleotide cofactor [1]. This domain corresponds to the C-terminal domain IV in dimethyl sulfoxide (DMSO)reductase which interacts with the 2-amino pyrimidone ring of both molybdopterin guanine dinucleotide molecules [2].
Domain
A, C
PF18465Rieske 3Fe-4S (Rieske_3)Rieske 3Fe-4SThis domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of ...This domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of Gram-negative organisms. The large subunit of arsenite oxidase is similar to other members of the dimethylsulfoxide (DMSO) reductase family of molybdenum enzymes. The large subunit of arsenite oxidase is divided into four domains, with domain I binding the [3Fe-4S] cluster . Domain I, consists of three antiparallel beta sheets and six helices. The [3Fe-4S] cluster is coordinated by the motif Cys21-X2-Cys24-X3-Cys28 near the interface with domains III and IV. A large, flattened funnel-like cavity bounded by domains I, II, and III leads to the molybdenum center Pfam:PF00384 located near the center of the molecule [1].
Domain
A, C
PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductaseDomain
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
D, F, H
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
PF01568Molydopterin dinucleotide binding domain (Molydop_binding)Molydopterin dinucleotide binding domainThis domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entire s ...This domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entire subunit. The formylmethanofuran dehydrogenase catalyses the first step in methane formation from CO2 in methanogenic archaea and has a molybdopterin dinucleotide cofactor [1]. This domain corresponds to the C-terminal domain IV in dimethyl sulfoxide (DMSO)reductase which interacts with the 2-amino pyrimidone ring of both molybdopterin guanine dinucleotide molecules [2].
Domain
PF18465Rieske 3Fe-4S (Rieske_3)Rieske 3Fe-4SThis domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of ...This domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of Gram-negative organisms. The large subunit of arsenite oxidase is similar to other members of the dimethylsulfoxide (DMSO) reductase family of molybdenum enzymes. The large subunit of arsenite oxidase is divided into four domains, with domain I binding the [3Fe-4S] cluster . Domain I, consists of three antiparallel beta sheets and six helices. The [3Fe-4S] cluster is coordinated by the motif Cys21-X2-Cys24-X3-Cys28 near the interface with domains III and IV. A large, flattened funnel-like cavity bounded by domains I, II, and III leads to the molybdenum center Pfam:PF00384 located near the center of the molecule [1].
Domain
PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductaseDomain
PF01568Molydopterin dinucleotide binding domain (Molydop_binding)Molydopterin dinucleotide binding domainThis domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entire s ...This domain is found in various molybdopterin - containing oxidoreductases and tungsten formylmethanofuran dehydrogenase subunit d (FwdD) and molybdenum formylmethanofuran dehydrogenase subunit (FmdD); where the domain constitutes almost the entire subunit. The formylmethanofuran dehydrogenase catalyses the first step in methane formation from CO2 in methanogenic archaea and has a molybdopterin dinucleotide cofactor [1]. This domain corresponds to the C-terminal domain IV in dimethyl sulfoxide (DMSO)reductase which interacts with the 2-amino pyrimidone ring of both molybdopterin guanine dinucleotide molecules [2].
Domain
PF18465Rieske 3Fe-4S (Rieske_3)Rieske 3Fe-4SThis domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of ...This domain is comprised of the iron-sulphur cluster and Rieske subunit found in the large subunit of arsenite oxidase. Arsenite oxidase is a 100 kDa molybdenum- and iron-sulfur-containing protein located on the outer surface of the inner membrane of Gram-negative organisms. The large subunit of arsenite oxidase is similar to other members of the dimethylsulfoxide (DMSO) reductase family of molybdenum enzymes. The large subunit of arsenite oxidase is divided into four domains, with domain I binding the [3Fe-4S] cluster . Domain I, consists of three antiparallel beta sheets and six helices. The [3Fe-4S] cluster is coordinated by the motif Cys21-X2-Cys24-X3-Cys28 near the interface with domains III and IV. A large, flattened funnel-like cavity bounded by domains I, II, and III leads to the molybdenum center Pfam:PF00384 located near the center of the molecule [1].
Domain
PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductaseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Arsenite oxidase subunit AioA
Arsenite oxidase subunit AioB -
D, F, H
Arsenite oxidase subunit AioB -
Arsenite oxidase subunit AioA
Arsenite oxidase subunit AioA

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR006657Molybdopterin dinucleotide-binding domainDomain
A, C
IPR006656Molybdopterin oxidoreductaseDomain
A, C
IPR014066Arsenite oxidase subunit AioA/Iodate reductase subunit IdrA, large subunitFamily
A, C
IPR041632Arsenite oxidase subunit AioA/Iodate reductase subunit IdrA, 3Fe-4S clusterDomain
A, C
IPR009010Aspartate decarboxylase-like domain superfamilyHomologous Superfamily
A, C
IPR050123Prokaryotic molybdopterin-containing oxidoreductaseFamily
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
IPR005805Rieske iron-sulphur protein, C-terminalDomain
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
IPR014349Rieske iron-sulphur proteinFamily
IPR014067Arsenite oxidase subunit AioB/Iodate reductase subunit IdrB, small subunitFamily
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealConserved Site
D, F, H
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
D, F, H
IPR005805Rieske iron-sulphur protein, C-terminalDomain
D, F, H
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
D, F, H
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
D, F, H
IPR014349Rieske iron-sulphur proteinFamily
D, F, H
IPR014067Arsenite oxidase subunit AioB/Iodate reductase subunit IdrB, small subunitFamily
D, F, H
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealConserved Site
IPR006657Molybdopterin dinucleotide-binding domainDomain
IPR006656Molybdopterin oxidoreductaseDomain
IPR014066Arsenite oxidase subunit AioA/Iodate reductase subunit IdrA, large subunitFamily
IPR041632Arsenite oxidase subunit AioA/Iodate reductase subunit IdrA, 3Fe-4S clusterDomain
IPR009010Aspartate decarboxylase-like domain superfamilyHomologous Superfamily
IPR050123Prokaryotic molybdopterin-containing oxidoreductaseFamily
IPR006657Molybdopterin dinucleotide-binding domainDomain
IPR006656Molybdopterin oxidoreductaseDomain
IPR014066Arsenite oxidase subunit AioA/Iodate reductase subunit IdrA, large subunitFamily
IPR041632Arsenite oxidase subunit AioA/Iodate reductase subunit IdrA, 3Fe-4S clusterDomain
IPR009010Aspartate decarboxylase-like domain superfamilyHomologous Superfamily
IPR050123Prokaryotic molybdopterin-containing oxidoreductaseFamily