X-RAY DIFFRACTION
Starting Model(s)
| Initial Refinement Model(s) | |||
|---|---|---|---|
| Type | Source | Accession Code | Details | 
| experimental model | PDB | 2IMZ | PDB Entry: 2IMZ | 
Crystallization
| Crystalization Experiments | ||||
|---|---|---|---|---|
| ID | Method | pH | Temperature | Details | 
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 283 | 65% ammmonium sulfate 100 mM Tris.HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 283K | 
| Crystal Properties | |
|---|---|
| Matthews coefficient | Solvent content | 
| 1.89 | 34.97 | 
Crystal Data
| Unit Cell | |
|---|---|
| Length ( Å ) | Angle ( ˚ ) | 
| a = 36.73 | α = 90 | 
| b = 49.42 | β = 90 | 
| c = 64.25 | γ = 90 | 
| Symmetry | |
|---|---|
| Space Group | P 21 21 21 | 
Diffraction
| Diffraction Experiment | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
| 1 | 1 | x-ray | 100 | IMAGE PLATE | RIGAKU RAXIS IV | osmic | 2006-01-01 | M | SINGLE WAVELENGTH | |||||
| Radiation Source | |||||
|---|---|---|---|---|---|
| ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline | 
| 1 | ROTATING ANODE | RIGAKU | 1.5418 | ||
Data Collection
| Overall | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot | ||||||||
| 1 | 1.8 | 30 | 99.4 | 0.05 | 15.4 | 4.1 | 11342 | 11342 | 15 | ||||||||||
| Highest Resolution Shell | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID # | Resolution (High) | Resolution (Low) | Percent Possible (All) | Percent Possible (Observed) | R Merge I (Observed) | Mean I Over Sigma (Observed) | Redundancy | Number Unique Reflections (All) | |||||||||||
| 1.8 | 1.86 | 98.3 | 0.23 | 5.1 | 3.8 | ||||||||||||||
Refinement
| Statistics | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Diffraction ID | Structure Solution Method | Cross Validation method | Starting model | Resolution (High) | Resolution (Low) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (Observed) | R-Work (Depositor) | R-Work (DCC) | R-Free (Depositor) | R-Free (DCC) | R-Free Selection Details | Mean Isotropic B | ||||
| X-RAY DIFFRACTION | MOLECULAR REPLACEMENT | THROUGHOUT | PDB Entry: 2IMZ | 1.8 | 26.94 | 11288 | 1105 | 99.3 | 0.236 | 0.236 | 0.24 | 0.285 | 0.28 | RANDOM | 23.6 | ||||
| Temperature Factor Modeling | ||||||
|---|---|---|---|---|---|---|
| Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[1][3] | Anisotropic B[2][2] | Anisotropic B[2][3] | Anisotropic B[3][3] | |
| -6.43 | 14.91 | -8.48 | ||||
| RMS Deviations | |
|---|---|
| Key | Refinement Restraint Deviation | 
| c_dihedral_angle_d | 24.9 | 
| c_scangle_it | 2.76 | 
| c_mcangle_it | 2.01 | 
| c_scbond_it | 1.93 | 
| c_mcbond_it | 1.34 | 
| c_angle_deg | 1.3 | 
| c_improper_angle_d | 0.68 | 
| c_bond_d | 0.005 | 
| c_bond_d_na | |
| c_bond_d_prot | |
| Non-Hydrogen Atoms Used in Refinement | |
|---|---|
| Non-Hydrogen Atoms | Number | 
| Protein Atoms | 1087 | 
| Nucleic Acid Atoms | |
| Solvent Atoms | 95 | 
| Heterogen Atoms | 5 | 
Software
| Software | |
|---|---|
| Software Name | Purpose | 
| CNS | refinement | 
| CrystalClear | data collection | 
| CrystalClear | data reduction | 
| CrystalClear | data scaling | 
| CNS | phasing | 














