GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1MF0 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1MF0_GDP_A_1452 | 79% | 53% | 0.13 | 0.976 | 0.92 | 0.91 | 2 | 2 | 1 | 0 | 100% | 1 |
| 2DGN_GDP_A_1452 | 86% | 54% | 0.111 | 0.981 | 0.94 | 0.86 | 2 | 2 | 0 | 0 | 100% | 1 |
| 1LNY_GDP_B_1454 | 82% | 53% | 0.107 | 0.961 | 1.01 | 0.8 | 2 | 2 | 3 | 0 | 100% | 1 |
| 1LON_GDP_A_1453 | 77% | 55% | 0.126 | 0.966 | 0.92 | 0.81 | 2 | 1 | 1 | 0 | 100% | 1 |
| 1MEZ_GDP_A_1452 | 70% | 53% | 0.147 | 0.966 | 1.02 | 0.82 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
