GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1PLL designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1PLL_GDP_A_167 | 69% | 20% | 0.147 | 0.962 | 1.46 | 1.92 | 3 | 9 | 4 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5E95_GDP_A_201 | 99% | 49% | 0.054 | 0.988 | 0.95 | 1.03 | 1 | 1 | 0 | 0 | 100% | 1 |
| 6MQT_GDP_B_201 | 99% | 66% | 0.055 | 0.985 | 0.83 | 0.5 | 2 | - | 0 | 0 | 100% | 0.998 |
| 1ZVQ_GDP_A_180 | 97% | 45% | 0.064 | 0.982 | 0.93 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8CNN_GDP_A_206 | 97% | 52% | 0.067 | 0.985 | 0.99 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
