PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 2EFY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2EFY_PLP_A_413 | 87% | 20% | 0.108 | 0.981 | 1.47 | 1.92 | 1 | 3 | 1 | 0 | 100% | 1 |
2EFY_PLP_B_913 | 83% | 17% | 0.123 | 0.981 | 1.81 | 1.8 | 3 | 3 | 1 | 0 | 100% | 1 |
1VE1_PLP_A_413 | 72% | 35% | 0.135 | 0.959 | 1.23 | 1.34 | 3 | 2 | 0 | 0 | 100% | 1 |
2ECQ_PLP_A_413 | 63% | 31% | 0.163 | 0.958 | 1.27 | 1.46 | 2 | 1 | 1 | 0 | 100% | 1 |
2ECO_PLP_A_413 | 61% | 28% | 0.166 | 0.955 | 1.42 | 1.48 | 3 | 1 | 0 | 0 | 100% | 1 |
2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |