GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2G83 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2G83_GDP_B_355 | 90% | 2% | 0.073 | 0.957 | 3.69 | 3.03 | 17 | 16 | 2 | 0 | 100% | 1 |
| 2G83_GDP_A_355 | 90% | 1% | 0.071 | 0.954 | 4.31 | 2.99 | 23 | 19 | 1 | 0 | 100% | 1 |
| 1AS2_GDP_A_355 | 96% | 8% | 0.078 | 0.99 | 1.43 | 3.07 | 5 | 12 | 0 | 0 | 100% | 1 |
| 4PAN_GDP_A_401 | 96% | 24% | 0.079 | 0.988 | 1.21 | 1.9 | 3 | 7 | 0 | 0 | 100% | 1 |
| 1AS3_GDP_A_355 | 95% | 15% | 0.084 | 0.988 | 1.47 | 2.25 | 5 | 5 | 3 | 0 | 100% | 1 |
| 3UMR_GDP_A_400 | 94% | 48% | 0.08 | 0.98 | 1.03 | 0.99 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1SVK_GDP_A_355 | 88% | 31% | 0.086 | 0.96 | 1.49 | 1.26 | 6 | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
