Ligand validation:2VDR

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2VDR designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2VDR_NAG_B_3099	6%	64%	0.215	0.647	0.49	0.87	-	1	0	0	100%	1
2VDR_NAG_A_3015	2%	68%	0.279	0.515	0.47	0.74	-	-	0	0	100%	0.7
2VDR_NAG_A_3249	1%	62%	0.254	0.422	0.48	0.97	-	1	0	0	100%	0.7
4MMZ_NAG_A_1002	60%	56%	0.116	0.901	0.42	1.25	-	2	2	0	100%	1
4MMX_NAG_B_702	57%	75%	0.094	0.869	0.35	0.62	-	-	2	0	100%	1
6MK0_NAG_A_1017	52%	89%	0.175	0.935	0.26	0.38	-	-	0	0	100%	1
4Z7Q_NAG_D_503	49%	73%	0.095	0.839	0.54	0.5	-	-	0	0	100%	1
6MSL_NAG_B_702	40%	70%	0.184	0.896	0.49	0.65	-	-	2	0	100%	1
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	1
5F9W_NAG_A_510	100%	88%	0.023	0.994	0.24	0.43	-	-	0	0	100%	1
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	1
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	1
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.