GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3LX8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3LX8_GDP_A_300 | 55% | 29% | 0.171 | 0.941 | 1.4 | 1.43 | 6 | 4 | 0 | 0 | 100% | 1 |
| 7BWV_GDP_A_301 | 89% | 16% | 0.098 | 0.976 | 1.97 | 1.7 | 7 | 6 | 0 | 0 | 100% | 1 |
| 3SS8_GDP_A_300 | 84% | 30% | 0.118 | 0.98 | 1.39 | 1.39 | 2 | 5 | 0 | 0 | 100% | 1 |
| 3B1W_GDP_A_300 | 84% | 31% | 0.109 | 0.97 | 1.38 | 1.38 | 3 | 4 | 0 | 0 | 100% | 1 |
| 7BVU_GDP_A_302 | 79% | 44% | 0.12 | 0.966 | 0.92 | 1.22 | 1 | 4 | 1 | 0 | 100% | 1 |
| 4NON_GDP_B_301 | 77% | 45% | 0.113 | 0.951 | 0.93 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
