UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3RUF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3RUF_UDP_B_344 | 84% | 28% | 0.092 | 0.953 | 1.16 | 1.73 | 1 | 8 | 0 | 0 | 100% | 1 |
| 3RUF_UDP_S_344 | 82% | 33% | 0.093 | 0.947 | 1.13 | 1.51 | 3 | 8 | 0 | 0 | 100% | 1 |
| 3RUF_UDP_b_343 | 75% | 36% | 0.092 | 0.924 | 0.96 | 1.55 | 1 | 8 | 0 | 0 | 100% | 1 |
| 3RUF_UDP_A_344 | 63% | 25% | 0.117 | 0.912 | 1.19 | 1.83 | 2 | 11 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
