GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4FMB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4FMB_GDP_B_202 | 98% | 14% | 0.051 | 0.977 | 1.98 | 1.92 | 5 | 5 | 4 | 0 | 100% | 1 |
4FMB_GDP_D_202 | 95% | 18% | 0.058 | 0.963 | 1.86 | 1.69 | 3 | 7 | 1 | 0 | 100% | 1 |
4FMB_GDP_F_202 | 83% | 16% | 0.081 | 0.939 | 2.03 | 1.67 | 5 | 6 | 3 | 0 | 100% | 1 |
1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |