Ligand validation:4WFA

SPD: SPERMIDINE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4WFA_SPD_X_3433	42%	95%	0.218	0.937	0.17	0.21	-	-	2	0	100%	1
4WFA_SPD_X_3428	35%	97%	0.219	0.909	0.17	0.15	-	-	3	0	100%	1
4WFA_SPD_X_3430	24%	97%	0.279	0.913	0.13	0.19	-	-	4	0	100%	1
4WFA_SPD_X_3432	23%	94%	0.25	0.873	0.21	0.22	-	-	3	0	100%	1
4WFA_SPD_X_3434	17%	96%	0.262	0.843	0.17	0.2	-	-	1	0	100%	1
4WFA_SPD_X_3427	11%	92%	0.329	0.855	0.2	0.34	-	-	0	0	100%	1
4WFA_SPD_J_201	8%	97%	0.274	0.744	0.15	0.18	-	-	0	0	100%	1
4WFA_SPD_X_3431	4%	96%	0.388	0.749	0.16	0.18	-	-	0	0	100%	1
4WFA_SPD_X_3429	0%	96%	0.645	0.609	0.2	0.15	-	-	0	0	100%	1
3C6K_SPD_A_501	100%	56%	0.031	0.993	0.37	1.31	-	1	1	0	100%	1
4C0Z_SPD_A_1223	95%	63%	0.064	0.966	0.7	0.73	-	-	3	0	100%	1
5JC9_SPD_DA_3190	92%	97%	0.089	0.979	0.12	0.19	-	-	0	0	100%	1
5J7L_SPD_DA_3187	90%	92%	0.094	0.978	0.19	0.33	-	-	0	0	100%	1
7XJM_SPD_B_401	90%	91%	0.078	0.961	0.25	0.33	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.