SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5MX2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5MX2_SQD_a_410 | 55% | 36% | 0.147 | 0.915 | 1.13 | 1.37 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5MX2_SQD_A_409 | 51% | 30% | 0.148 | 0.902 | 1.12 | 1.65 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5MX2_SQD_a_412 | 34% | 46% | 0.16 | 0.855 | 0.89 | 1.17 | 2 | 6 | 0 | 0 | 93% | 1 |
| 5MX2_SQD_f_102 | 29% | 27% | 0.228 | 0.922 | 1.27 | 1.68 | 4 | 10 | 0 | 0 | 80% | 1 |
| 5MX2_SQD_L_101 | 25% | 6% | 0.166 | 0.82 | 1.22 | 3.78 | 4 | 10 | 0 | 0 | 89% | 1 |
| 5MX2_SQD_D_412 | 25% | 24% | 0.211 | 0.881 | 1.27 | 1.8 | 4 | 10 | 0 | 0 | 80% | 1 |
| 5MX2_SQD_b_601 | 23% | 32% | 0.18 | 0.803 | 1.14 | 1.53 | 4 | 13 | 0 | 0 | 100% | 1 |
| 5MX2_SQD_A_411 | 18% | 37% | 0.197 | 0.786 | 1.14 | 1.34 | 4 | 8 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 0 | 0 | 100% | 1 |
| 5B66_SQD_a_409 | 79% | 23% | 0.091 | 0.936 | 1.01 | 2.11 | 4 | 11 | 0 | 0 | 100% | 1 |
| 3WU2_SQD_A_412 | 78% | 25% | 0.089 | 0.932 | 0.86 | 2.15 | 2 | 17 | 0 | 0 | 100% | 1 |
| 6W1V_SQD_A_409 | 78% | 25% | 0.089 | 0.937 | 1.02 | 2.02 | 4 | 16 | 0 | 0 | 96% | 1 |
