XYS: alpha-D-xylopyranose
XYS is a Ligand Of Interest in 6T8E designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6T8E_XYS_C_505 | 77% | 31% | 0.08 | 0.919 | 1.14 | 1.58 | 1 | 4 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_D_505 | 74% | 43% | 0.082 | 0.912 | 0.85 | 1.34 | - | 1 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_B_506 | 70% | 41% | 0.083 | 0.9 | 1.05 | 1.25 | - | 2 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_C_506 | 66% | 53% | 0.09 | 0.894 | 0.9 | 0.92 | - | - | 0 | 0 | 100% | 1 |
| 6T8E_XYS_D_506 | 62% | 36% | 0.092 | 0.881 | 1.3 | 1.24 | 2 | 1 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_A_505 | 59% | 35% | 0.096 | 0.878 | 1.23 | 1.32 | 2 | 2 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_B_505 | 57% | 36% | 0.105 | 0.878 | 0.9 | 1.6 | - | 3 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_A_506 | 41% | 45% | 0.119 | 0.833 | 1.05 | 1.06 | - | 1 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_A_507 | 27% | 41% | 0.141 | 0.783 | 0.46 | 1.81 | - | 4 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_C_507 | 24% | 44% | 0.137 | 0.761 | 0.39 | 1.72 | - | 3 | 0 | 0 | 100% | 1 |
| 6T8E_XYS_B_507 | 20% | 25% | 0.142 | 0.74 | 0.59 | 2.41 | - | 6 | 0 | 0 | 100% | 1 |
| 5NHE_XYS_D_504 | 52% | 47% | 0.159 | 0.915 | 0.95 | 1.08 | - | 1 | 1 | 0 | 100% | 1 |
| 5NH7_XYS_C_505 | 49% | 49% | 0.167 | 0.913 | 0.84 | 1.13 | - | 2 | 1 | 0 | 100% | 1 |
| 5NHD_XYS_D_504 | 43% | 42% | 0.177 | 0.899 | 0.91 | 1.35 | - | 2 | 0 | 0 | 100% | 1 |
| 5A03_XYS_B_1342 | 92% | 33% | 0.063 | 0.953 | 1.68 | 1.01 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8OZ1_XYS_A_804 | 91% | 61% | 0.064 | 0.967 | 0.83 | 0.66 | - | - | 0 | 0 | 90% | 1 |
| 8BQA_XYS_AAA_402 | 88% | 34% | 0.058 | 0.951 | 0.83 | 1.77 | - | 3 | 0 | 0 | 90% | 1 |
| 7PLC_XYS_C_302 | 85% | 63% | 0.096 | 0.961 | 0.55 | 0.87 | - | 1 | 1 | 0 | 100% | 1 |
| 2CDC_XYS_D_1371 | 82% | 48% | 0.1 | 0.954 | 1.01 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |
