Download MendeleyArg65Gln Mutagenic E.coli PCK
Sokaribo, A.S., Cotelesage, J.H., Novakovski, B., Goldie, H., Sanders, D.To be published.
6CRT | pdb_00006crt
Arg65Gln Mutagenic E.coli PCK
- PDB DOI: https://doi.org/10.2210/pdb6CRT/pdb
- Classification: LYASE
- Organism(s): Escherichia coli
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2018-03-19 Released: 2018-04-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.210 (Depositor), 0.210 (DCC)
- R-Value Work: 0.157 (Depositor), 0.160 (DCC)
- R-Value Observed: 0.160 (Depositor)
Starting Model: experimental
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This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phosphoenolpyruvate carboxykinase (ATP) | 540 | Escherichia coli | Mutation(s): 1 Gene Names: pckA, EC55989_3809 EC: 4.1.1.49 |  | |
UniProt | |||||
Find proteins for P22259 (Escherichia coli (strain K12)) Explore P22259 Go to UniProtKB: P22259 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P22259 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ATP Query on ATP | B [auth A] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | ||
| MN Query on MN | C [auth A], D [auth A] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.210 (Depositor), 0.210 (DCC)
- R-Value Work: 0.157 (Depositor), 0.160 (DCC)
- R-Value Observed: 0.160 (Depositor)
Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 124.993 | α = 90 |
| b = 95.301 | β = 96.4 |
| c = 46.34 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data scaling |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2018-04-04 Deposition Author(s): Sokaribo, A.S., Cotelesage, J.H., Novakovski, B., Goldie, H., Sanders, D.
Revision History (Full details and data files)
- Version 1.0: 2018-04-04
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Derived calculations, Refinement description
