Download MendeleyN-Terminal Protein Complexation and Assembly with a Triangular Sulfated Macrocycle
Ifeagwu, M.C., Guo, L., Mockler, N.M., Dong, M., Li, C., Crowley, P.B.(2025) Cryst Growth Des
9I1N | pdb_00009i1n
The MK-RSL - sulfato-terphen[3]arene complex, P63 form, citrate pH 4.0
- PDB DOI: https://doi.org/10.2210/pdb9I1N/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Ralstonia solanacearum
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2025-01-16 Released: 2025-07-02
- Funding Organization(s): Science Foundation Ireland
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.193 (Depositor), 0.191 (DCC)
- R-Value Work: 0.156 (Depositor), 0.156 (DCC)
- R-Value Observed: 0.158 (Depositor)
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fucose-binding lectin protein | 91 | Ralstonia solanacearum | Mutation(s): 1 Gene Names: E7Z57_08365, HF909_06975, LBW55_09125, RUN39_v1_50103 |  | |
UniProt | |||||
Find proteins for A0A0S4TLR1 (Ralstonia solanacearum) Explore A0A0S4TLR1 Go to UniProtKB: A0A0S4TLR1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0S4TLR1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| A1IZO (Subject of Investigation/LOI) Query on A1IZO | B [auth A] | sulfato-terphen[3]arene complex C57 H42 O48 S12 LVXLICATRYFFND-UHFFFAOYSA-N |  | ||
| BDF Query on BDF | C [auth A], D [auth A] | beta-D-fructopyranose C6 H12 O6 LKDRXBCSQODPBY-ARQDHWQXSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.193 (Depositor), 0.191 (DCC)
- R-Value Work: 0.156 (Depositor), 0.156 (DCC)
- R-Value Observed: 0.158 (Depositor)
Space Group: P 63
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.526 | α = 90 |
| b = 43.526 | β = 90 |
| c = 85.907 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
| autoPROC | data processing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-07-02 Deposition Author(s): Ifeagwu, M.C., Mockler, N.M., Crowley, P.B.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Science Foundation Ireland | Ireland | 12/RC/2275_P2 |
Revision History (Full details and data files)
- Version 1.0: 2025-07-02
Type: Initial release
